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@10XGenomics

10x Genomics

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  1. cellranger cellranger Public

    10x Genomics Single Cell Analysis

    Rust 339 91

  2. loupeR loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    R 80 12

Repositories

Showing 10 of 66 repositories
  • rust-debruijn Public

    De Bruijn graphs in Rust

    10XGenomics/rust-debruijn’s past year of commit activity
    Rust 63 MIT 16 1 4 Updated Jul 1, 2024
  • zarr Public Forked from preyasshah/zarr

    Rust implementation of the Zarr N-dimensional array format.

    10XGenomics/zarr’s past year of commit activity
    Rust 0 Apache-2.0 5 0 1 Updated Jun 28, 2024
  • loupeR Public

    Convert Seurat objects to 10x Genomics Loupe files.

    10XGenomics/loupeR’s past year of commit activity
    R 80 12 8 0 Updated Jun 25, 2024
  • enclone_ranger Public

    Core components for enclone

    10XGenomics/enclone_ranger’s past year of commit activity
    Rust 3 4 0 10 Updated Jun 24, 2024
  • seurat Public Forked from satijalab/seurat

    R toolkit for single cell genomics

    10XGenomics/seurat’s past year of commit activity
    R 1 GPL-3.0 898 0 0 Updated Jun 24, 2024
  • scan-rs Public

    Single-cell analysis methods in Rust

    10XGenomics/scan-rs’s past year of commit activity
    Rust 12 1 1 1 Updated Jun 13, 2024
  • lz4-rs Public Forked from bozaro/lz4-rs

    Rust LZ4 bindings

    10XGenomics/lz4-rs’s past year of commit activity
    Rust 43 MIT 71 5 2 Updated Jun 11, 2024
  • HumanColonCancer_VisiumHD Public

    Associated code to the manuscript "Characterization of immune cell populations in the tumor microenvironment of colorectal cancer using high definition spatial profiling"

    10XGenomics/HumanColonCancer_VisiumHD’s past year of commit activity
    R 18 1 2 0 Updated Jun 6, 2024
  • fastq_set Public

    Tools for working FASTQ files from sequencers (R1/R2/I1/I2)

    10XGenomics/fastq_set’s past year of commit activity
    Rust 11 3 0 10 Updated May 29, 2024
  • orbit Public

    Rust wrapper for STAR aligner

    10XGenomics/orbit’s past year of commit activity
    C 13 MIT 2 0 4 Updated May 27, 2024
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