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@NationalGenomicsInfrastructure

National Genomics Infrastructure

The Swedish National Genomics Infrastructure (NGI), a technology platform at SciLifeLab, serving primarily Swedish academia.

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  1. piper piper Public

    Forked from Molmed/piper

    A genomics pipeline build on top of the GATK Queue framework

    Scala 9 9

  2. ngi_pipeline ngi_pipeline Public

    Forked from mariogiov/ngi_pipeline

    Code driving the production pipeline at SciLifeLab

    Python 6 24

  3. charon charon Public

    Forked from pekrau/charon

    Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.

    Python 3 8

  4. irma-provision irma-provision Public

    Ansible playbooks for provisioning NGI pipeline and related sw

    Jinja 1 17

  5. miarka-provision miarka-provision Public

    Ansible playbooks for provisioning NGI cluster Miarka

    Jinja 2 11

Repositories

Showing 10 of 28 repositories
  • ngi_reports Public

    Code to generate reports for use by the NGI in SciLifeLab

    NationalGenomicsInfrastructure/ngi_reports’s past year of commit activity
    HTML 5 MIT 13 0 2 Updated Jul 4, 2024
  • miarka-provision Public

    Ansible playbooks for provisioning NGI cluster Miarka

    NationalGenomicsInfrastructure/miarka-provision’s past year of commit activity
    Jinja 2 11 3 2 Updated Jul 4, 2024
  • charon Public Forked from pekrau/charon

    Database for IGN projects and samples, with RESTful interface. Built on top of Tornado and CouchDB.

    NationalGenomicsInfrastructure/charon’s past year of commit activity
    Python 3 MIT 10 4 0 Updated Jul 3, 2024
  • userman Public Forked from pekrau/userman

    Simple user account handling system for use with web services. Built on top of Tornado and CouchDb.

    NationalGenomicsInfrastructure/userman’s past year of commit activity
    Python 0 MIT 3 0 0 Updated Jul 2, 2024
  • MultiQC_NGI Public

    MultiQC plugin for the National Genomics Infrastructure in Stockholm, Sweden.

    NationalGenomicsInfrastructure/MultiQC_NGI’s past year of commit activity
    Python 2 MIT 8 0 0 Updated Jul 2, 2024
  • DailyRead Public

    The NGI Daily Read

    NationalGenomicsInfrastructure/DailyRead’s past year of commit activity
    Python 0 2 2 0 Updated Jun 26, 2024
  • ngi_pipeline Public Forked from mariogiov/ngi_pipeline

    Code driving the production pipeline at SciLifeLab

    NationalGenomicsInfrastructure/ngi_pipeline’s past year of commit activity
    Python 6 25 22 0 Updated Jun 24, 2024
  • tower-showcase Public Forked from seqeralabs/showcase

    Infrastructure as code implementation of the seqeralabs/showcase Workspace in Tower Cloud

    NationalGenomicsInfrastructure/tower-showcase’s past year of commit activity
    Shell 0 MPL-2.0 10 0 0 Updated May 6, 2024
  • ngisweden.se Public

    Wordpress theme and plugins for https://ngisweden.se

    NationalGenomicsInfrastructure/ngisweden.se’s past year of commit activity
    PHP 0 MIT 9 1 0 Updated Apr 4, 2024
  • NGI-AS-tech_note-2024 Public Forked from remiolsen/NGI-AS-tech_note-2024
    NationalGenomicsInfrastructure/NGI-AS-tech_note-2024’s past year of commit activity
    0 MIT 1 0 0 Updated Feb 29, 2024
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