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    8 repositories

    • cell-annotation-service-client

      Public
      Python client libraries for Cellarium Cloud Cell Annotation Service (CAS).
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •1•0•0•0•Updated May 6, 2024May 6, 2024

    • scanpy

      Public
      Single-Cell Analysis in Python. Scales to >1M cells.
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •582•0•0•0•Updated Apr 17, 2023Apr 17, 2023

    • napari

      Public
      napari: a fast, interactive, multi-dimensional image viewer for python
      Python
      •
      BSD 3-Clause "New" or "Revised" License
      •413•0•0•0•Updated Apr 9, 2021Apr 9, 2021

    • cellranger-atac

      Public
      Python
      •
      Other
      •9•15•6•1•Updated Jan 20, 2021Jan 20, 2021

    • longranger

      Public
      10x Genomics Linked-Read Alignment, Variant Calling, Phasing, and Structural Variant Calling
      Python
      •
      Other
      •4•30•4•1•Updated Jul 31, 2020Jul 31, 2020

    • souporcell

      Public
      Clustering scRNAseq by genotypes
      Python
      •
      MIT License
      •44•1•0•1•Updated Mar 9, 2020Mar 9, 2020

    • single-cell-3prime-snp-clustering

      Public
      zheng2016
      Python
      •
      Other
      •8•22•4•0•Updated Apr 6, 2018Apr 6, 2018

    • tsne

      Public
      A python wrapper for Barnes-Hut tsne
      Python
      •
      Other
      •132•1•0•0•Updated Jun 14, 2017Jun 14, 2017